BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB033E09LP1|AL429759
(852 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1088 1651 0.0
3x_Contig1747 153 6e-37
3x_Contig1204 131 2e-30
3x_Contig582 131 2e-30
3x_Contig1718 129 9e-30
3x_Contig1376 129 9e-30
3x_Contig727 127 4e-29
3x_Contig631 127 4e-29
>3x_Contig1088
Length = 4585
Score = 1651 bits (832), Expect = 0.0
Identities = 850/854 (99%), Gaps = 2/854 (0%)
Strand = Plus / Minus
Query: 1 acatagtattgaacttgacataagtcaaattgcccaattttgttgaatataaaattctaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2220 acatagtattgaacttgacataagtcaaattgcccaattttgttgaatataaaattctaa 2161
Query: 61 tattcccattattatctgctttgcagttgaacgatgtgatgcagtctctcgcattttcta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2160 tattcccattattatctgctttgcagttgaacgatgtgatgcagtctctcgcattttcta 2101
Query: 121 taaaccacttatgagttacaatttcgcaggtcgatacatcatcgaatgatatgatacaaa 180
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2100 taaaccacttatgagtaacaatttcgcaggtcgatacatcatcgaatgatatgatacaaa 2041
Query: 181 tactatcgcctgtattaaatgcaatccaggaaactttagtaacttttgcgttctcttgtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2040 tactatcgcctgtattaaatgcaatccaggaaactttagtaacttttgcgttctcttgtt 1981
Query: 241 tgaatgaaatcttaggcacatccactatcgataaataattcaactcaaaatcaaagtttg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1980 tgaatgaaatcttaggcacatccactatcgataaataattcaactcaaaatcaaagtttg 1921
Query: 301 actcactaataggaattattatatccaattgtgtggttttcttctctttgaaattatata 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1920 actcactaataggaattattatatccaattgtgtggttttcttctctttgaaattatata 1861
Query: 361 ggattagttcaccaatatttttggaactcttagtgttgcatagcctcgtataaagaacat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1860 ggattagttcaccaatatttttggaactcttagtgttgcatagcctcgtataaagaacat 1801
Query: 421 atttggatgactgcgtaacgaaataagaccttattgttgcgtcatcttcgattacg-atc 479
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 1800 atttggatgactgcgtaacgaaataagaccttattgttgcgtcatcttcgattacgcatc 1741
Query: 480 tcctccattatttgacaattccgctatcatagaagccaaagaggatatcttgaaatcatg 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1740 tcctccattatttgacaattccgctatcatagaagccaaagaggatatcttgaaatcatg 1681
Query: 540 tggttaatgaatgaatcagctgaccctgagttgttgagtcagttaacatcaatatcttta 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1680 tggttaatgaatgaatcagctgaccctgagttgttgagtcagttaacatcaatatcttta 1621
Query: 600 gcgctgtgatgagctgagcaacacacataggatattaattttttgatctccaatgtcgag 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1620 gcgctgtgatgagctgagcaacacacataggatattaattttttgatctccaatgtcgag 1561
Query: 660 aagttctttccatagtaaaagaatacaaaavatgttaaaaataaaaattctccgcgacgg 719
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 1560 aagttctttccatagtaaaagaatacaaaaaatgttaaaaataaaaattctccgcgacgg 1501
Query: 720 ggaattgaaccccgatctcgcacgcgacaag-gcgaattctaaccattaaactatcgcgg 778
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 1500 ggaattgaaccccgatctcgcacgcgacaagcgcgaattctaaccattaaactatcgcgg 1441
Query: 779 acgatttctgtttcactgttatgtacgcccctccccatcgaagattctgttgaaacggat 838
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1440 acgatttctgtttcactgttatgtacgcccctccccatcgaagattctgttgaaacggat 1381
Query: 839 cataaaccatgatc 852
||||||||||||||
Sbjct: 1380 cataaaccatgatc 1367
>3x_Contig1747
Length = 15671
Score = 153 bits (77), Expect = 6e-37
Identities = 84/85 (98%), Gaps = 1/85 (1%)
Strand = Plus / Plus
Query: 696 aaaaataaaaattctccgcgacggggaattgaaccccgatctcgcacgcgacaag-gcga 754
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 2378 aaaaataaaaattctccgcgacggggaattgaaccccgatctcgcacgcgacaagcgcga 2437
Query: 755 attctaaccattaaactatcgcgga 779
|||||||||||||||||||||||||
Sbjct: 2438 attctaaccattaaactatcgcgga 2462
>3x_Contig1204
Length = 5869
Score = 131 bits (66), Expect = 2e-30
Identities = 73/74 (98%), Gaps = 1/74 (1%)
Strand = Plus / Minus
Query: 707 ttctccgcgacggggaattgaaccccgatctcgcacgcgacaag-gcgaattctaaccat 765
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 5791 ttctccgcgacggggaattgaaccccgatctcgcacgcgacaagcgcgaattctaaccat 5732
Query: 766 taaactatcgcgga 779
||||||||||||||
Sbjct: 5731 taaactatcgcgga 5718
>3x_Contig582
Length = 2827
Score = 131 bits (66), Expect = 2e-30
Identities = 73/74 (98%), Gaps = 1/74 (1%)
Strand = Plus / Minus
Query: 709 ctccgcgacggggaattgaaccccgatctcgcacgcgacaag-gcgaattctaaccatta 767
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 1785 ctccgcgacggggaattgaaccccgatctcgcacgcgacaagcgcgaattctaaccatta 1726
Query: 768 aactatcgcggacg 781
||||||||||||||
Sbjct: 1725 aactatcgcggacg 1712
>3x_Contig1718
Length = 19496
Score = 129 bits (65), Expect = 9e-30
Identities = 72/73 (98%), Gaps = 1/73 (1%)
Strand = Plus / Plus
Query: 708 tctccgcgacggggaattgaaccccgatctcgcacgcgacaag-gcgaattctaaccatt 766
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 4260 tctccgcgacggggaattgaaccccgatctcgcacgcgacaagcgcgaattctaaccatt 4319
Query: 767 aaactatcgcgga 779
|||||||||||||
Sbjct: 4320 aaactatcgcgga 4332
>3x_Contig1376
Length = 7449
Score = 129 bits (65), Expect = 9e-30
Identities = 72/73 (98%), Gaps = 1/73 (1%)
Strand = Plus / Minus
Query: 709 ctccgcgacggggaattgaaccccgatctcgcacgcgacaag-gcgaattctaaccatta 767
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 6482 ctccgcgacggggaattgaaccccgatctcgcacgcgacaagcgcgaattctaaccatta 6423
Query: 768 aactatcgcggac 780
|||||||||||||
Sbjct: 6422 aactatcgcggac 6410
>3x_Contig727
Length = 2486
Score = 127 bits (64), Expect = 4e-29
Identities = 71/72 (98%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 709 ctccgcgacggggaattgaaccccgatctcgcacgcgacaag-gcgaattctaaccatta 767
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 1102 ctccgcgacggggaattgaaccccgatctcgcacgcgacaagcgcgaattctaaccatta 1161
Query: 768 aactatcgcgga 779
||||||||||||
Sbjct: 1162 aactatcgcgga 1173
>3x_Contig631
Length = 2339
Score = 127 bits (64), Expect = 4e-29
Identities = 71/72 (98%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 709 ctccgcgacggggaattgaaccccgatctcgcacgcgacaag-gcgaattctaaccatta 767
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 1009 ctccgcgacggggaattgaaccccgatctcgcacgcgacaagcgcgaattctaaccatta 1068
Query: 768 aactatcgcgga 779
||||||||||||
Sbjct: 1069 aactatcgcgga 1080
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7421
Number of Sequences: 1807
Number of extensions: 7421
Number of successful extensions: 51
Number of sequences better than 1.0e-20: 8
length of query: 852
length of database: 10,358,551
effective HSP length: 16
effective length of query: 836
effective length of database: 10,329,639
effective search space: 8635578204
effective search space used: 8635578204
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)